CPU charts (server/process/app pool) are confusing when there are more than one CPU core. Percentages go above the 100 mark and charts don't render them well, the plotted line often going outside the cart.
Processor time counter under the Process Object gives the amount of CPU this Process is taking individually. This value is calculated over the base line of (No of Logical CPUS * 100), So this is going to be a calculated over a baselin of more than 100.
There may come up a condition that this Value is more than 400 ie. more than (No of Logical CPUS * 100) this indicates that the Process is extensively using Multithreading and using the Processor to more than its capacity.
CPU chart render will change in upcoming DotNET release to accommodate this situation.
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