To migrate content where the source file path is longer than the Office 365 file path limit, enable the "Truncate Long Paths" option in Essentials For Office 365.
To do this, click on the "Help" tab and select the "Profile Manager" icon.
Select the "Migration" tab and then enable the "Truncate Long Paths" option:
Enter a value in the "Max Length Before Overflow" that is lower than the Office 365 file path limit.
More information regarding Truncating Long Paths can be found here.
More information regarding Metalogix Essentials For Office 365 can be found here.
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