While migrating SharePoint root site to target tenant that has been mapped to a non-root site, a migration will revert the mapped target site to root site and continue with the migration.
Tried to re-map and confirm mapping is updated with ODMSP UI, but the issue persists.
Root site has been mapped and migrated once before the mapping was performed.
To resolve this issue, perform the following high-level steps:
Reference the below articles on how to properly map the root site from a file: